BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014D05SP1|AL426678
(787 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1724 1512 0.0
>3x_Contig1724
Length = 20938
Score = 1512 bits (762), Expect = 0.0
Identities = 783/788 (99%), Gaps = 2/788 (0%)
Strand = Plus / Plus
Query: 1 gattcaaactaactaattttgattcacattgtaaaatttcatcttctactttagcaatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17758 gattcaaactaactaattttgattcacattgtaaaatttcatcttctactttagcaatct 17817
Query: 61 ttgtcattatttccttctccgtttcctgatcattggattcagtatttgacaagtcaattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17818 ttgtcattatttccttctccgtttcctgatcattggattcagtatttgacaagtcaattt 17877
Query: 121 tcagagcggttcttcttggcgatggaggctgtcctgccttgcttggagaggattcctctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17878 tcagagcggttcttcttggcgatggaggctgtcctgccttgcttggagaggattcctctg 17937
Query: 181 tgtctcgttcatttccatgtattttctgttcagtcgtattttcatcttggttatttctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17938 tgtctcgttcatttccatgtattttctgttcagtcgtattttcatcttggttatttctct 17997
Query: 241 ctttattcacaatatttagcctatacaggccagtagaatcgctcaccactcttttactca 300
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 17998 ctttattcacaatatttagc-tatacaggccagtagaatcgctcaccactgttttactca 18056
Query: 301 tctttgataaaaatgctggggtttaattgctgactgttcctgatacattattacattcat 360
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18057 tgtttgataaaaatgctggggtttaattgctgactgttcctgatacattattacattcat 18116
Query: 361 tctttactttgctgcacactttttctatgcaaaggcatttcatttacctttattttaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18117 tctttactttgctgcacactttttctatgcaaaggcatttcatttacctttattttaaat 18176
Query: 421 ctgaacaatgtaaacaatagacatcttcaccatttagaaaatagaaaagagaaggttgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18177 ctgaacaatgtaaacaatagacatcttcaccatttagaaaatagaaaagagaaggttgaa 18236
Query: 481 agttcaaacagtgaagtttgtgatcaccaggaaag-agaaagcactaaaggaggcatagc 539
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 18237 agttcaaacagtgaagtttgtgatcaccaggaaagcagaaagcactaaaggaggcatagc 18296
Query: 540 ctacatttttattgcaaaactttgttttcactaatcttgagagatagacaaaggtcaaag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18297 ctacatttttattgcaaaactttgttttcactaatcttgagagatagacaaaggtcaaag 18356
Query: 600 agggcgaataatactcaatatttgaatacataatggcccaattagtatacctgtgtttcc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18357 agggcgaataatactcaatatttgaatacataatggcccaattagtatacctgtgtttcc 18416
Query: 660 gtgataacacgctcagcgaacccttctcgaacttgattgatatgaaatacgatcaccaga 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18417 gtgataacacgctcagcgaacccttctcgaacttgattgatatgaaatacgatcaccaga 18476
Query: 720 tcaaggtatcaaaaccatcgttcaagttgccagagtttgaaaaggtgaagcaattgattg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18477 tcaaggtatcaaaaccatcgttcaagttgccagagtttgaaaaggtgaagcaattgattg 18536
Query: 780 awatttgc 787
| ||||||
Sbjct: 18537 aaatttgc 18544
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7034
Number of Sequences: 1807
Number of extensions: 7034
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 787
length of database: 10,358,551
effective HSP length: 16
effective length of query: 771
effective length of database: 10,329,639
effective search space: 7964151669
effective search space used: 7964151669
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)